PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62731.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 91aa    MW: 10721.2 Da    PI: 10.7228
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62731.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.31.8e-15958255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++++ Lr+++P++    ++K + a+ L ++++Y++sLq
  EPS62731.1  9 RSKHSVTEQRRRSKINERYQILRRIIPHS----DQKRDTASFLLEVIHYVQSLQ 58
                899*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-20679IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-17668IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.085757IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-13958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.17E-12962No hitNo description
SMARTSM003534.3E-101363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
GKANANATRS KHSVTEQRRR SKINERYQIL RRIIPHSDQK RDTASFLLEV IHYVQSLQEK  60
VQKYEGGSYQ TWSLEPAKLM PWVKTHWNLA S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002312362.21e-43hypothetical protein POPTR_0008s11120g
RefseqXP_006379719.14e-44hypothetical protein POPTR_0008s11120g
RefseqXP_011021046.11e-43PREDICTED: transcription factor BIM2-like isoform X1
RefseqXP_015158971.12e-43PREDICTED: transcription factor BIM2-like isoform X1
SwissprotQ9CAA44e-40BIM2_ARATH; Transcription factor BIM2
TrEMBLS8CDZ58e-63S8CDZ5_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0008s11120.14e-43(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-41BES1-interacting Myc-like protein 2
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]